Category Archives: Induced Pluripotent Stem Cells


Univ. of Washington and Sana researchers use gene editing to prep stem cells for heart repair – GeekWire

Heart muscle regeneration researchers (left to right) Naoto Muraoka, Elaheh Karbassi, and Chuck Murry. (University of Washington Photo)

Human stem cell scientists have long dreamed of repairing damaged hearts, but have been stymied by researchshowing that the cells yield irregular heartbeats in laboratory animals. A new genetic engineering approach overcomes this barrier, according to a report at the annual meeting of the International Society for Stem Cell Research by scientists at the University of Washington and Sana Biotechnology, a Seattle-based company.

A heart attack typically kills about one billion cells, said Charles Murry, director of the Institute for Stem Cell and Regenerative Medicine at the UW, who presented the data Monday. Such massive cell death can lead to downstream effects such as heart failure, an often-debilitating condition that affects about 6.2 million people in the U.S. Using stem cells to repair the damage after a heart attack has long been a goal in his lab.

One major challenge in the field is that implanting cells into the hearts of laboratory animals can nudge the whole heart into beating rapidly, a condition called engraftment arrhythmia, said Murry, who is also a senior vice president and head of cardiometabolic cell therapy at Sana, which went public earlier this year.

This engraftment arrhythmia, where the heart races too quickly, has been one of the major hurdles weve been trying to overcome en route to clinical trials, said Murry in a press release.

In their study, Murry and his colleagues quelled engraftment arrhythmia using a genetic engineering strategy in cells implanted into pig hearts. Their next step is to see if the cells can repair heart damage in macaques if those studies work, the researchers will initiate clinical trials in people, he said.

To quell the arrhythmia, Murry and his colleagues turned to CRISPR, the Nobel Prize-winning technique to knock out genes. They knocked out three genes in stem cells encoding different ion channels, molecules embedded in the cell membrane that mediate impulses that propagate heart beats. They also added DNA for another ion channel, KCNJ2, which mediates the movement of potassium across the membrane, Its a chill out channel, Murry told GeekWire, It tells the heart cell not to be so excitable.

The engineered stem cells, derived from human embryonic stem cells, were coaxed in a petri dish to produce heart muscle cells, which were then implanted into pigs via open heart surgery or a catheter. The result was an even heartbeat the genetically altered cells did not cause engraftment arrhythmia.

The researchers landed on this strategy after years of effort, assessing which channels were present in the cells during arrhythmia, and knocking out multiple types of channels until they hit the right combination.

In their next set of experiments in macaques, We want to make sure these cells are still effective, said Murry, They look good beating in culture, so I think they are going to be OK. Moving forward, the researchers will also use induced human pluripotent stem cells, obtainable from adults and more amenable longer-term for clinical use.

In another recent study, published in Cell Systems, scientists at the Allen Institute for Cell Science took a close look at cardiac muscle cells derived from stem cells. They found that they could classify the state of the cells, such as how mature they were, by assessing both cell structure and which genes were turned on.

This paints a broader picture of our cells. If someone wants to really understand and characterize a cells state, we found that having both of these types of information can be complementary, said Kaytlyn Gerbin, a scientist at the Allen Institute for Cell Science in a statement. The findings provide a fine-tooth analysis of cell state, which may guide future experiments on cardiac muscle and other cell types.

Murrys research was conducted primarily at the UW, with financial support from Sana. In addition to its cardiac program, Sana has cell and gene therapy programs in diabetes, blood disorders, immunotherapy and other areas.

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Univ. of Washington and Sana researchers use gene editing to prep stem cells for heart repair - GeekWire

Ubiquitination is essential for recovery of cellular activities after heat shock – Science Magazine

Tailoring stress responses

When faced with environmental stress, cells respond by shutting down cellular processes such as translation and nucleocytoplasmic transport. At the same time, cells preserve cytoplasmic messenger RNAs in structures known as stress granules, and many cellular proteins are modified by the covalent addition of ubiquitin, which has long been presumed to reflect degradation of stress-damaged proteins (see the Perspective by Dormann). Maxwell et al. show that cells generate distinct patterns of ubiquitination in response to different stressors. Rather than reflecting the degradation of stress-damaged proteins, this ubiquitination primes cells to dismantle stress granules and reinitiate normal cellular activities once the stress is removed. Gwon et al. show that persistent stress granules are degraded by autophagy, whereas short-lived granules undergo a process of disassembly that is autophagy independent. The mechanism of this disassembly depends on the initiating stress.

Science, abc3593 and abf6548, this issue p. eabc3593 and p. eabf6548; see also abj2400, p. 1393

In response to many types of stress, eukaryotic cells initiate an adaptive and reversible response that includes down-regulation of key cellular activities along with sequestration of cytoplasmic mRNAs into structures called stress granules. Accompanying these stress responses is a global increase in ubiquitination that has been conventionally ascribed to the need for degradation of misfolded or damaged proteins. However, detailed characterization of how the ubiquitinome is reshaped in response to stress is lacking. Furthermore, it is unclear whether stress-dependent ubiquitination plays a more complex role in the larger stress response beyond its known protective function in targeting hazardous proteins for proteasomal degradation.

To explore the role of ubiquitination in the stress response, we used tandem ubiquitin binding entity (TUBE) proteomics to investigate changes to the ubiquitination landscape in response to five different types of stress in cultured mammalian cells, including human induced pluripotent stem cell (iPSC)derived neurons. The discovery of unanticipated patterns of ubiquitination prompted a detailed analysis of the ubiquitination pattern specifically induced by heat shock by using diGly ubiquitin remnant profiling along with tandem mass tag quantitative proteomics in combination with additional total proteome and transcriptome analyses. Insights from this newly defined heat shock ubiquitinome guided subsequent investigation of the functional importance of this posttranslational modification in the cellular response to heat shock.

Each of the five different types of stress induced a distinctive pattern of ubiquitination. The heat shock ubiquitinome in human embryonic kidney 293T cells was defined by ubiquitination of specific proteins that function within cellular activities that are down-regulated during stress (e.g., translation and nucleocytoplasmic transport), and this pattern was similar in U2OS cells, primary mouse neurons, and human iPSC-derived neurons. The heat shock ubiquitinome was also enriched in protein constituents of stress granules. Suprisingly, this stress-induced ubiquitination was dispensable for the formation of stress granules and shutdown of cellular pathways; rather, heat shockinduced ubiquitination was a prerequisite for p97/valosin-containing protein (VCP)mediated stress granule disassembly and for resumption of normal cellular activities, including nucleocytoplasmic transport and translation, upon recovery from stress. Many ubiquitination events were specific to one or another stress. For example, ubiquitination was required for disassembly of stress granules induced by heat stress but dispensable for disassembly for stress granules induced by oxidative (arsenite) stress.

Ubiquitination patterns are specific to different types of stress and indicate additional regulatory functions for stress-induced ubiquitination beyond the removal of misfolded or damaged proteins. Specifically, heat shockinduced ubiquitination primes the cell for recovery from stress by targeting specific proteins involved several pathways down-regulated during stress. Furthermore, some key stress granule constituents are ubiquitinated in response to heat stress but not arsenite stress, thus engaging a mechanism of VCP mediateddisassembly of heat shockinduced granules that is not shared by arsenite stressinduced granules. Finally, our deep proteomics datasets provide a rich community resource illuminating additional aspects of the roles of ubiquitination in response to stress.

(A) Proteomics-based ubiquitinome profiling reveals that different stresses induce distinct patterns of ubiquitin conjugation. TEV, tobacco etch virus protease cleavage site; Ub, ubiquitin; UBA, ubiquitin-associated domain; UV, ultraviolet. (B) Heat stressinduced ubiquitination targets proteins associated with cellular activities down-regulated during stress, including nucleocytoplasmic (NC) transport and translation, as well as stress granule constituents. This ubiquitination is required for the timely resumption of biological activity and stress granule disassembly after the removal of stress. mRNP, messenger ribonucleoprotein.

Eukaryotic cells respond to stress through adaptive programs that include reversible shutdown of key cellular processes, the formation of stress granules, and a global increase in ubiquitination. The primary function of this ubiquitination is thought to be for tagging damaged or misfolded proteins for degradation. Here, working in mammalian cultured cells, we found that different stresses elicited distinct ubiquitination patterns. For heat stress, ubiquitination targeted specific proteins associated with cellular activities that are down-regulated during stress, including nucleocytoplasmic transport and translation, as well as stress granule constituents. Ubiquitination was not required for the shutdown of these processes or for stress granule formation but was essential for the resumption of cellular activities and for stress granule disassembly. Thus, stress-induced ubiquitination primes the cell for recovery after heat stress.

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Ubiquitination is essential for recovery of cellular activities after heat shock - Science Magazine

The CCL2-CCR2 astrocyte-cancer cell axis in tumor extravasation at the brain – Science Advances

INTRODUCTION

An estimated 20% of all cancer patients develop metastatic tumors at the brain (1). Highly lethal with a 30% 5-year survival rate (2), these metastases stem from circulating tumor cells (TCs) in brain capillaries, originating predominantly from lung, breast, melanoma, or colorectal primary cancers (3), that transmigrate into the parenchyma. This occurs despite the fact that the interface between brain capillaries and tissue, also termed blood-brain barrier (BBB), is one of the tightest vascular barriers in humans and is characterized by highly regulated transport mechanisms (4).

The vast majority of studies on the mechanisms of brain metastasis have focused on TC survival and proliferation following transmigration, once cells are lodged in the brain tissue (59). For instance, interactions, in the brain parenchyma, between TCs and brain astrocytes (ACs) have been shown to promote the secretion of inflammatory factors by ACs via connexin 43 gap junctions, which, in turn, support tumor growth and chemoresistance (6). Although these findings provide insights into cellular interactions and signaling pathways used by metastatic cancer cells to survive and proliferate in the brain tissue, extravasation precedes growth at the secondary site and is a rate-regulating event in the metastatic cascade, where ~40% of extravasated TCs are able to colonize and successfully establish metastases within the brain (10, 11). Despite the importance of extravasation in the development of metastases and the significant fraction of cancer patients that develop brain metastases, the processes that govern extravasation from blood to brain remain poorly understood.

Difficulties in disentangling the mechanisms responsible for the extravasation step from those promoting colonization and outgrowth in the brain have impeded in-depth understanding of the processes underlying brain metastasis. In addition, conducting high spatiotemporal resolution imaging in vivo has been challenging. To address these limitations, a few studies have used in vitro models to investigate the mechanisms of TC extravasation at the brain. Among these models, two-dimensional (2D) Transwell coculture systems have been and continue to be frequently used, including cocultures of ACs with human umbilical vein endothelial cells (ECs) (12) or brain ECs (13). These high-throughput 2D in vitro extravasation platforms (12, 13) have revealed important insights into the molecular mechanisms mediating extravasation at the brain; however, they cannot recapitulate TC circulation, arrest, and extravasation from three-dimensional (3D) brain capillaries, which occur in vivo (1214). To overcome the major limitations of current in vivo and in vitro brain extravasation models, we used a 3D platform designed by our group (15) that recapitulates BBB capillaries with microvascular networks (MVNs) composed of induced pluripotent stem cellderived ECs (iPS-ECs), brain pericytes (PCs), and ACs into which we perfused circulating TCs to study extravasation at the brain.

In addition to the triculture BBB model, we used three variants incorporating different combinations of iPS-ECs and brain stromal cells to dissect the individual roles of PCs, ACs, and their secreted factors on TC extravasation. The all-inclusive triculture model with iPS-ECs, PCs, and ACs (15) was found to be the most robust system, faithfully recapitulating the extravasation microenvironment of the human BBB in vivo.

In this triculture 3D BBB platform, where distinct cellular and molecular interactions governing extravasation can be observed and quantified in real time or by end point analysis, we uncovered a central role for the C-C motif chemokine ligand 2 (CCL2)C-C chemokine receptor type 2 (CCR2) signaling pathway in brain extravasation, where ACs directly promote TC transmigration through CCL2 secretion. These findings were further validated in vivo, confirming that this moderate-throughput human BBB-on-a-chip system can provide unparalleled strength in dissecting cellular and molecular mechanisms underlying the extravasation of cancer cells at the brain and could serve as a robust, complementary method to in vivo approaches.

To investigate mechanisms governing TC extravasation at the brain and the roles of different stromal cells in this rate-limiting step of brain metastasis, we designed four MVN platforms in a single gel-channel microfluidic device (1517): (i) a monoculture of iPS-EC, (ii) a coculture of iPS-EC and PC, (iii) a coculture of iPS-EC and AC, and (iv) a triculture of iPS-EC, PC, and AC as our BBB microvascular model (Fig. 1A). Notably, iPS-ECs are used in this assay owing to their superior plasticity and ability to self-assemble into perfusable MVNs in both the presence and absence of PCs and/or ACs compared to other EC lines (18, 19). The sequential addition of PCs and ACs allowed us to isolate their individual contributions on TC extravasation.

(A) Schematic of the microfluidic chip used in the study to generate four MVN platforms from the sequential addition of PCs and ACs to iPS-ECs. (B) MDA-MB-231 (MDA-231) cells perfused in the triculture MVNs and left to extravasate for 6 hours. Examples of extravasated and intravascular TCs are shown. (C) Extravasation efficiencies of breast MDA-231, breast SKBR3, lung A549, and prostate 22Rv1 in the four MVN platforms at 24 hours after perfusion. (D) MVN permeability to 40 kDa of dextran in the four platforms considered. Permeability is also assessed in the presence of MDA-231 TCs and their conditioned media (CM). (E) Representative images of triculture MVNs perfused with 40-kDa fluorescein isothiocyanatedextran (green) with and without MDA-231 TCs. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001; not significant; n.s.#, not significant across all conditions (pairwise).

The step-wise incorporation of PCs and ACs progressively improved the morphology and barrier permeability of the MVNs (15), and the all-inclusive, triculture MVNs highly recapitulated key morphological and functional properties of the natural BBB, particularly its cellular organization, its expression of junctional proteins, and its deposition of a functional basement membrane and glycocalyx (fig. S1, A to C, and table S1) (20, 21). Notably, the vessel structures of the triculture MVN model closely resembled in vivo brain capillaries (22) compared to all other in vitro BBB models to date (19, 2326).

To evaluate the robustness of our 3D in vitro BBB model as a surrogate platform to study brain metastasis, we used well-established in vivo and in vitro models from previous studies as our benchmarks (12, 27). In these studies, both parental breast cancer cells (MDA-MB-231, abbreviated here as MDA-Par or MDA-231) and lung metastatic cells derived from the parental line (MDA-LM2-4175 or MDA-LM) (27) exhibited reduced ability to form brain metastases after intracardiac injection, in sharp contrast to the brain metastatic line derived from the parental line (MDA-BrM2a or MDA-BrM) (12). In our platforms, while both MDA-BrM and MDA-LM demonstrated superior extravasation ability compared to parental MDA-231 in the monoculture iPS-EC MVNs, this was not the case in the triculture system, where only MDA-BrM cells displayed increased extravasation levels compared to both parental MDA-231 and MDA-LM. This suggests that the triculture MVN model functionally recapitulates other in vivo models of brain metastasis (fig. S2, A and B).

The highly expressed ST6GALNAC5 (ST6) in MDA-BrM cells was found to promote cancer cell extravasation in the brain in a 2D in vitro model (12), and knockdown (KD) of ST6 reduced brain metastasis formation after intracardiac injection. To further validate the triculture MVN model and its use as a tumor extravasation platform, we knocked down ST6 in MDA-BrM cells (fig. S2, C, D, F, and G) and validated that their extravasation efficiency was reduced compared to control cells (fig. S2E). However, their reduced extravasation levels remained greater than those of parental MDA-231 cells, as previously found in the in vivo model, but unlike prior observations in 2D in vitro models (12). Our triculture 3D BBB model, therefore, more closely recapitulates the features of in vivo models of brain metastasis compared to 2D in vitro brain extravasation assays, and, importantly, these findings suggest that ST6GALNAC5 is not the only factor affecting TC extravasation at the brain.

Breast cancer, lung cancer, and melanoma are the leading causes of brain metastasis among all cancer patients (3). In addition, brain metastases are also observed in patients with prostate cancer (28). Hence, we used breast cancer cell lines (MDA-231 and SKBR3), lung cancer cell line (A549), and prostate cancer cell line (22Rv1) in this study, aiming to identify general mechanisms of cancer cell extravasation into the brain. Following TC perfusion under transient flow in the MVNs (Fig. 1A) (17), all cells observed to partially or completely cross the endothelium were classified as extravasated (Fig. 1B). Despite differences in the baseline extravasation efficiency of each cell line in the iPS-EC alone MVNs (fig. S3A), the sequential addition of brain stromal cells always resulted in significant increases in extravasation after 24 hours (Fig. 1C and fig. S2A). Similar trends were observed 6 hours following perfusion (fig. S3B). These results are in line with prior evidence of the prometastatic role of PCs and ACs when TCs are lodged in the brain tissue after extravasation (57, 9).

Next, we sought to assess whether stromal-tumor cell interactions at the brain and the subsequent increase in extravasation were caused by changes in barrier integrity. The latter was evaluated using solute permeability to fluorescent dextran (29, 30). For each of the four MVN platforms considered, the permeability to either 10 or 40-kDa dextrans in MVNs remained unaltered despite the presence of TCs, up to 24 hours after TC perfusion (Fig. 1D and fig. S3C). In addition, the treatment of the MVNs with conditioned media (CM) from MDA-231 for 24 hours resulted in similar observations. This, coupled with a visible lack of focal leaks in the microvasculature following extravasation (Fig. 1E), confirmed that barrier integrity in each of four platforms considered remains intact despite TC transmigration or the presence of TC-secreted factors. This suggests that increased extravasation efficiencies in the presence of PCs and ACs are not caused by disruptions in endothelial junctions, which would increase paracellular transport and result in increased permeability values to lowmolecular weight dextrans (29).

On the basis of these results, we hypothesized that brain stromal cells act directly on intravascular cancer cells and their ability to transmigrate without needing to alter barrier integrity. To test this, monoculture iPS-EC MVNs were perfused with TCs and treated with conditioned medium from PCs or ACs, cultured either alone (PC and AC CM) or in Transwell systems above MDA-231 [PC (+MDA-231) CM and AC (+MDA-231) CM] (Fig. 2A). The addition of stromal cell CM, particularly when PCs and ACs are activated by the cancer cells in the case of PC (+MDA-231) CM and AC (+MDA-231) CM, significantly increased the extravasation efficiency of TCs (Fig. 2, B and C), suggesting that PC- and AC-secreted factors play important roles in the ability of cancer cells to extravasate.

(A) Schematic of the collection of PC and AC CM and subsequent treatment of the MVNs before TC perfusion. (B) Extravasation efficiencies of breast MDA-231 in monoculture MVNs with or without CM treatment at 24 hours after perfusion. (C) Representative images of breast MDA-231 in monoculture MVNs with or without CM treatment at 24 hours after perfusion. (D) Heatmap for cytokine array showing relative magnitudes of secreted factors from MDA-231, iPS-EC, PC, and AC alone, as well as iPS-EC, PC, and AC cultured in Transwell inserts with MDA-231 cells after 24 hours of culture. (E) Relative magnitude of significantly up-regulated cytokines/chemokines by PC or AC cultured in inserts with MDA-231 compared to iPS-EC cultured with MDA-231.(F) Representative images of 2D immunofluorescence staining for F-actin + DAPI, CCL2, and PDGF-BB in iPS-ECs, PCs, and ACs, cultured with MDA-231 in Transwell inserts. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001; not significant; n.s.#, not significant across all conditions (pairwise).

Cytokine arrays on conditioned medium from iPS-ECs, PCs, and ACs, in the presence or absence of MDA-231, revealed several highly expressed factors, notably inflammatory and chemotactic cytokines such as interleukin-6 (IL-6), IL-8, and CCL2 (Fig. 2D). Since cancer cell extravasation was significantly increased in the presence of brain stromal cells and their secreted factors compared to monoculture iPS-EC MVNs (Figs. 1C and 2B and fig. S3B), we postulated that up-regulated cytokines by PC (+MDA-231) and AC (+MDA-231) compared to iPS-EC (+MDA-231) could play a role in increasing extravasation (Fig. 2E). Several of these were commonly up-regulated by both PCs and ACs, such as insulin-like growth factorbinding protein 4 (IGFBP-4), platelet-derived growth factor (PDGF)BB, and CCL26, while some were specific to each brain stromal cell, such as IL-6 for PCs or CCL2 and osteopontin (OPN) for ACs. These findings were validated by immunofluorescence staining for PDGF-BB, CCL2, and IGFBP-4 (Fig. 2F and fig. S4A).

CCL2 was found to be specifically up-regulated by AC (+MDA-231) compared to iPS-EC (+MDA-231) and PC (+MDA-231), whereas PDGF-BB was found to be up-regulated by both stromal cells compared to iPS-ECs (fig. S4B). Similar results were obtained for iPS-ECs, PCs, and ACs cultured in the absence of MDA-231 cancer cells (fig. S4, C and D). Having established that the cytokine profiles of PCs and ACs exhibit notable differences compared to those of iPS-ECs, we next investigated the role of the identified up-regulated factors in cancer cell extravasation.

To uncover the key secreted factors responsible for the proextravasation effect, we used a panel of blocking antibodies against candidate cytokines previously identified (Fig. 2E) (31). Only CCL2 blockade significantly reduced TC transmigration in the triculture BBB MVNs (Fig. 3A). As evidenced in media collected from triculture devices, the concentration of CCL2 is the largest of all secreted cytokines (~2700 pg/ml) (fig. S5, A and B) and is primarily expressed by ACs as shown from cytokine array results (Fig. 2D), immunofluorescence staining (Fig. 3B), and quantitative reverse transcription polymerase chain reaction (qRT-PCR) (fig. S5A). In addition, increasing the concentration of blocking antibody for CCL2 from 10 to 50 g/ml did not affect cancer cell extravasation, suggesting that the concentration used in the blocking antibody panel (10 g/ml) was sufficient to elicit a response (fig. S5C).

(A) Extravasation efficiency of MDA-231 TCs in triculture MVNs with neutralizing antibodies at 6 hours after perfusion. Abs, antibodies. (B) Representative CCL2 staining in triculture MVNs and quantification of the CCL2 MFI per cell volume in iPS-ECs, PCs, and ACs. (C) Extravasation efficiency of MDA-231 in triculture MVNs with ACs treated with CCL2 small interfering RNA (siRNA) or control siRNA before device seeding. (D) Representative images of MDA-231 in triculture MVNs stained with anti-CD31 at 6 hours after perfusion, in the case of MVNs seeded with ACs treated with CCL2 siRNA or control siRNA. (E) Extravasation efficiency of MDA-231 in triculture MVNs treated with anti-CCR2 and/or anti-CCR4, and the appropriate control at three time points. Significance is assessed with respect to the control [dimethyl sulfoxide (DMSO)] condition. (F) Extravasation efficiency of MDA-231 in triculture MVNs, in the case of MDA-231 treated with anti-CCR2 and/or anti-CCR4, and the appropriate control at three time points. Significance is assessed with respect to the control (DMSO) condition. (G) Representative images of MDA-231 in triculture MVNs stained with anti-CD31, in the case of TCs treated with anti-CCR2 or the appropriate control at 6 hours after perfusion. (H) Representative images of A549 in triculture MVNs stained with anti-CD31, in the case of TCs treated with anti-CCR2 or the appropriate controlat 6 hours after perfusion. (I) Extravasation efficiency of A549 in triculture MVNs, in the case of A549 cells treated with anti-CCR2 and/or anti-CCR4, and the appropriate control at three time points. Significance is assessed with respect to the control (DMSO) condition. (J) Extravasation fold of all four TCs between iPS-EC + AC MVNs and the monoculture iPS-EC MVNs at 24 hours (left) and relative CCR2 gene expression [normalized by glyceraldehyde phosphate dehydrogenase (GAPDH)] for all four TCs measured via qRT-PCR (right). *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001; not significant; n.s.#, not significant across all conditions (pairwise).

The role of AC-derived CCL2 on transmigration was further validated by treating coculture MVNs of iPS-EC + PC and iPS-EC + AC with blocking antibody for CCL2. Extravasation was significantly reduced only in the case of MVNs cultured with ACs, confirming that these brain stromal cells constitute the main source of CCL2 in the devices (fig. S5D). This was also demonstrated by immunofluorescence staining, whereby the mean fluorescent intensity (MFI) for CCL2 was the highest in ACs in the different MVN platforms compared to PCs and iPS-ECs (fig. S5E). CCL2 levels were significantly higher in ACs in the triculture BBB MVNs compared to the coculture iPS-EC + AC MVNs. This could indicate that cellular interactions among all three cell types, occurring when the human BBB is recapitulated in the in vitro devices, are conducive to increases in CCL2 chemokine production by ACs. It is useful to note that while FGF-2 (fibroblast growth factor 2) was found at an average concentration of ~2900 pg/ml (greater than that of CCL2 in the triculture MVNs), it is a major component of the iPS-EC culture medium used in the devices (present at 5000 pg/ml) and was thus assumed not to be significantly secreted by any of the cells in the BBB MVNs (fig. S5B). Furthermore, KD of CCL2 in ACs before device seeding resulted in significant reductions in TC extravasation in the triculture MVNs at both 6 and 24 hours after perfusion (Fig. 3, C and D, and fig. S5F), highlighting the importance of AC-specific contributions of CCL2 in tumor transmigration at the BBB. Together, these findings suggest that, of all up-regulated cytokines by PCs and ACs compared to iPS-ECs, only AC-secreted CCL2 plays a role in cancer cell extravasation. We thus focused our investigation on this chemokine and its observed effect on the transmigration of circulating TCs at the brain.

CCL2 is known to preferentially bind CCR2 (32). It has also been reported to bind CCR4 on cytotoxic T lymphocytes and regulatory T cells in the context of their recruitment to melanoma tumors, although with lower affinity compared to CCR2 (33, 34). Considering these two receptors, we next evaluated whether blocking the CCL2-CCR2 or CCL2-CCR4 axes would result in any changes in TC extravasation.

Prior evidence suggests that intravascular colon cancer cells secrete CCL2 to activate the endothelium, increase its permeability via the Janus kinase 2signal transducer and activator of transcription 5 and p38 mitogen-activated protein kinase pathways, up-regulate E-selectin expression, and ultimately promote cancer cell adhesion and extravasation from the vasculature (35). We thus first investigated whether AC-derived CCL2, in our case, could similarly activate the endothelium to promote extravasation. To assess whether AC-derived CCL2 affects the vasculature in the context of extravasation, we treated the triculture MVNs with CCR2 and CCR4 antagonists before TC perfusion. Blocking either receptor or both in the ECs did not result in any changes in the extravasation potential of MDA-231 (Fig. 3E).

Next, we assessed the direct effect of CCR2 and CCR4 on cancer cells by blocking CCR2, CCR4, or both, on the MDA-231 cells, before perfusion. Here, blocking CCR2 or both receptors resulted in a significant decrease in TC extravasation (Fig. 3, F and G). In contrast, CCR4 blockade did not affect MDA-231 extravasation, suggesting that AC-TC interactions are mostly occurring via the CCR2 receptor on TCs.

This was also validated in MDA-BrM cells, where CCR2 blockade alone resulted in greater reductions of extravasation efficiencies compared to KD of ST6 alone (fig. S6, A and B). Similar observations were made in the parental MDA-231 line (fig. S6, C and D); however, blockade of ST6 did not result in significant reductions in extravasation compared to control cells. KD of CCR2 alone in MDA-BrM was sufficient to reduce extravasation levels below those of parental MDA-231, which was not the case when ST6 was knocked down alone (fig. S6A). These findings, coupled with increased CCR2 levels in parental MDA-231 and MDA-BrM (fig. S6, E to H), attest to the significance of AC-secreted CCL2 in promoting their extravasation at the brain through their CCR2 receptor.

To validate our observations on the role of CCR2 in other cell lines, we treated SKBR3, A549, and 22Rv1 cell lines with the same antagonist combinations (CCR2 and/or CCR4). Consistent with our hypothesis, both SKBR3 and 22Rv1 exhibited similar trends as MDA-231 TCs in their extravasation potential (fig. S7, A to C); however, the extravasation efficiencies of A549 were not affected by any of the antagonist treatments (Fig. 3, H and I). Notably, A549 cells exhibited the lowest fold change in extravasation efficiency between iPS-EC + AC and iPS-EC alone compared to other cell lines examined and also expressed the lowest CCR2 levels compared to the three other lines (Figs. 3J and 1C). This is consistent with our hypothesis that the proextravasation effect of ACs is indeed mediated through CCR2 expressed by cancer cells.

Prior evidence suggests that autocrine secretion of CCL2 promotes cancer cell transmigration, invasion, and metastasis in colon cancer (35), prostate cancer, and cervical carcinoma (36, 37). To exclude this possibility, we blocked the endogenous secretion of CCL2 in MDA-231 with the use of small interfering RNA (siRNA) probes, as performed with ACs before device seeding (Fig. 3, C and D). Perfusion in the monoculture or triculture MVNs did not result in any significant differences in the extravasation potential of MDA-231 treated with siRNA for CCL2 or control siRNA (fig. S8, A and B). Consistently, enzyme-linked immunosorbent assay (ELISA) revealed more than 100-fold larger secretions of CCL2 in the triculture MVNs with ACs compared with MDA-231 cells (~15 to 25 pg/ml for MDA-231 compared to ~2700 pg/ml in the triculture BBB, which had comparable numbers of cells at the time of analysis) (figs. S8C and S5B), validating that AC-secreted CCL2 plays a crucial role in TC transmigration in our system.

We next compared CCL2 levels across cancer cell lines. qRT-PCR results showed that A549 expressed the highest levels of CCL2, followed by SKBR3, MDA-231, and 22Rv1 (fig. S8D). We then examined whether blocking TC-secreted CCL2 in SKBR3, A549, and 22Rv1 would give rise to similar results as MDA-231 cells. Treatment with anti-CCL2 before TC perfusion resulted in significant reductions in the transmigration potential of A549 and SKBR3 only (fig. S9E), suggesting that there exists a correlation between autocrine CCL2 levels and TC transmigration at the brain. Given that ACs express significantly larger levels of CCL2 compared to all cancer cells (fig. S8D), endogenous CCL2 in A549 and SKBR3 must be directly affecting their transmigration without having major consequences on the endothelium, contrary to prior findings on colorectal and prostate TC-derived CCL2 on endothelial permeability and extravasation (35, 37).

Given its important role on TC transmigration, we next investigated the mechanism of action of AC-derived CCL2. First, we verified that the secreted chemokine could reach the intravascular TC. Immunofluorescence staining of triculture MVNs for CCL2 with and without perfused MDA-231 showed that although the overall CCL2 MFI per region of interest (ROI) remained constant, the presence of TCs resulted in significant decreases in CCL2 MFI per cell volume in ACs only (Fig. 4A and fig. S9A). This could be explained by an exchange of CCL2 between ACs and TCs, ultimately inducing transmigration.

(A) Representative CCL2 staining in triculture MVNs with and without MDA-231 cells and quantification of the CCL2 MFI per cell volume with and without TCs. CCL2 is shown in white, iPS-EC in red, PC in green, and AC in yellow. A.U., arbitrary units. (B) Heatmap of the CCL2 concentration in the 3D MVNs surrounded by ACs with an intravascular TC. Only diffusion is considered here given the absence of luminal fluid flow in the MVNs. (C) AC-TC distance near extravasating TCs over time in triculture MVNs with anti-CCL2 on MVNs or anti-CCR2 on TCs. (D) Representative images of extravasating TCs and its surrounding ACs over time in triculture MVNs with and without anti-CCR2 on TCs. The blue, green, and orange arrows at the different time points refer to individual ACs moving closer to the TC in the control case, or away from it in the anti-CCR2 case. (E) Extravasation efficiency of MDA-231 in monoculture iPS-EC and coculture iPS-EC + PC MVNs at 6 hours after perfusion, in the case of MVNs treated with different recombinant human CCL2 (rhCCL2) concentrations. (F) Average speed of MDA-231 before and after extravasation in the triculture MVNs treated with anti-CCL2 or for the case of TC treatment with anti-CCR2. (G) Average 2D migration speed of MDA-231 with or without rhCCL2 treatment at different concentrations. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001; not significant; n.s.#, not significant across all conditions (pairwise).

To validate these results further, we developed a computational model of CCL2 transport from ACs located near an intravascular TC (table S2). Simulation results verified that a constant flux of CCL2 from the ACs led to diffusive transport through the endothelial barrier via paracellular and transcellular pathways, reaching the TC and allowing its local consumption (TC surface concentration of ~4.5 108 mol/m3) (Fig. 4B) (38). Given that our MVNs are not subjected to fluid flow as is the case in vivo (39), we validated that the presence of convection (fluid velocity of ~0.5 mm/s) (40), in addition to diffusion (fig. S9B), resulted in CCL2 internalization by the intravascular TC within the same time frame and at similar surface concentration levels (~5 108 mol/m3) (fig. S9C). Because astrocytic sources of CCL2 are also located upstream from the cancer cells, CCL2 diffuses into the traveling bulk fluid ensuring that the chemokine is carried via convection to the downstream adhered TC. Thus, in the presence of microvascular convective phenomena, the CCL2 cytokine would still reach its target. It should be noted, however, that this transport analysis disregards the source/consumption kinetics of other cell types present in the in vivo microenvironment, such as neurons, microglia, or blood components (41, 42). Nevertheless, their effects were rendered negligible, given their low consumption rates and greater intercellular distances compared to AC-TC interactions.

Having confirmed that AC-derived CCL2 reaches the TCs, we next evaluated whether blocking the CCL2-CCR2 pathway resulted in any changes in the physical interactions between ACs and TCs. We transduced iPS-ECs, PCs, and ACs to express stable fluorescent tags before seeding the microfluidic chips to visualize cellular interactions in real time with high resolution (fig. S9D). The CCL2-CCR2 axis was blocked using a blocking antibody for CCL2 in the MVNs or an antagonist for CCR2 on TCs. Strikingly, distances between ACs and extravasating MDA-231 were found to increase over time when CCL2 was prevented from reaching the TCs (Fig. 4C and fig. S9E). This was not the case in the control MVNs, where ACs maintained close proximity with extravasating TCs (Fig. 4D). In addition to increased AC-TC distances over time, the number of ACs near MDA-231 was found to decrease when the CCL2-CCR2 pathway was blocked (fig. S9F). Conversely, in the control triculture MVNs, ACs were recruited near TCs during extravasation, attesting to the presence of spatial interactions that are dependent on the CCL2-CCR2 axis between the two cells.

CCL2, also referred to as monocyte chemoattractant protein-1 (MCP-1), is an established chemotactic factor that controls the infiltration of monocytes and macrophages (43). It has also been implicated in improvements in the motility and migration of chondrosarcoma cells, as well as gastric and bladder cancer cells (4446). We sought to understand whether these mechanisms were also observed at the BBB and whether CCL2-dependent chemotaxis between ACs and TCs was similarly responsible for increases in extravasation. To recapitulate the presence of CCL2 in the extracellular space of the MVNs where ACs are found, mono- and coculture devices with iPS-EC alone and iPS-EC + PC (no ACs) were treated with different concentrations of recombinant human CCL2 (rhCCL2) for 30 min before washing and TC perfusion. Given that CCL2 (~2700 pg/ml) is secreted in the triculture BBB MVNs, mostly by ACs compared to iPS-ECs and PCs (fig. S5A), we subjected the mono- and coculture devices to rhCCL2 [0 ng/ml (control), 1 ng/ml (low), 3 ng/ml (BBB MVN level), and 10 ng/ml (high)]. Washing the MVNs before perfusion removed all intravascular rhCCL2 to establish a chemokine gradient between luminal and interstitial spaces. Extravasation efficiencies of MDA-231 at 6 hours were found to significantly increase in the presence of 3 and 10 ng/ml compared to the control MVNs (Fig. 4E), confirming that the increase in TC transmigration can be partly explained by chemotaxis, where the astrocytic source of CCL2 is present in the extracellular matrix.

The average speed of MDA-231 in the triculture BBB MVNs was significantly lower when the CCL2-CCR2 axis was blocked (from ~11 m/hour in control MVNs to ~7 m/hour with anti-CCL2 or anti-CCR2) (Fig. 4F). This was the case for both intravascular and extravasated MDA-231, which were found to travel significantly less in the vessel and surrounding matrix (fig. S10A). These findings suggest that MDA-231 cells respond to chemokinetic cues in the BBB MVNs, whereby their speed is affected by available levels of the CCL2 chemokine (47, 48). The speed of ACs, on the other hand, was not altered when the CCL2-CCR2 axis was blocked, near intravascular or extravasated TCs (fig. S10B). This result was expected, given that MVN treatment with anti-CCL2 solely targets soluble chemokines in the devices without affecting their source (ACs in our case). In BBB MVNs not perfused with MDA-231, ACs also maintained the same average speed (~20 to 25 m/hour) (fig. S10C), suggesting that their migration patterns are independent of the presence of TCs and their secreted factors.

To further validate the chemokinesis hypothesis, MDA-231 were plated in 2D and subjected to different concentrations of rhCCL2 for 6 hours. Even minute amounts of rhCCL2 (1 ng/ml) resulted in significant increases in the speed of MDA-231, which plateaued at ~5 m/hour for 3 and 10 ng/ml compared to ~3.3 m/hour for 0 ng/ml (control) (Fig. 4G). TCs also spanned larger areas throughout their migration in 2D, as evidenced by their x-y displacement tracks over time for the four different treatments (fig. S10D). Together, these results indicate that TCs, via their CCR2 receptor, respond to both chemotactic and chemokinetic cues from AC-derived CCL2 in the MVNs. These cues ultimately trigger TC migration and transmigration from the brain vasculature and into the extracellular space.

Having established the role of ACs on TC extravasation via the CCL2-CCR2 pathway in an in vitro BBB MVN model, we next sought to validate our findings in vivo by knocking down CCR2 in MDA-231 cells (Fig. 5A). CCR2 KD short hairpin RNA (shRNA) MDA-231 transmigrated significantly less than control shRNA MDA-231 for all time points considered (6, 12, and 24 hours) (Fig. 5B), demonstrating that the shRNA KD can mimic the effects of the CCR2 antagonist applied on MDA-231 in vitro (Fig. 3F).

(A) Relative CCR2 gene expression normalized by GAPDH in control shRNA and CCR2 KD shRNA MDA-231 cells as measured by qRT-PCR. (B) Extravasation efficiency of control shRNA and CCR2 KD shRNA MDA-231 in triculture MVNs at three different time points. (C) Schematic of the TC intracardiac injection in mice, followed by brain harvesting, sectioning, immunofluorescence staining, and imaging. (D) Number of control shRNA and CCR2 KD shRNA MDA-231 cells remaining in mouse brains at 24 and 48 hours following intracardiac injection. (E) Representative images of brain sections perfused with MDA-231 (control shRNA and CCR2 KD shRNA) and stained with anti-CD31 at different time points. (F) Extravasation efficiency of control shRNA and CCR2 KD shRNA MDA-231 in mouse brains at 24 and 48 hours following intracardiac injection. (G) Representative images (collapsed z-stacks) of extravasated (orange arrows) and intravascular (blue arrows) MDA-231 (control shRNA and CCR2 KD shRNA) in mouse brains stained with anti-CD31 at 48 hours. (H) Representative images with cross sections of extravasated (orange arrows) and intravascular (blue arrows) MDA-231 (control shRNA and CCR2 KD shRNA) in mouse brains stained with anti-CD31 at 48 hours. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001; not significant; n.s.#, not significant across all conditions (pairwise).

Following the in vitro confirmation that CCR2 KD reduces extravasation, CCR2 KD shRNA or control shRNA MDA-231 cells were injected in athymic nude (NU/J) mice via ultrasound-guided intracardiac injections (49). Prior studies suggested that lung and melanoma cancer cells are able to extravasate at the brain as early as 24 hours after injection in mice (11). We thus chose 24 and 48 hours after injection as our time points for this study. At both time points, significantly fewer CCR2 KD shRNA MDA-231 were found in the mouse brain vessels or parenchyma compared to the control shRNA cells (Fig. 5, D and E, and fig. S11A). Given that arrest in the microcirculation is a necessary initial step of the metastatic cascade (10, 50), the decreased number of CCR2 KD shRNA MDA-231 remaining in the mouse brains over time suggests that these cells do not seem to be stimulated at this secondary site, potentially because of their lack of activation/interaction with cellular and molecular cues in the brain microenvironment (50).

We next quantified the transmigration potential of CCR2 KD shRNA and control shRNA MDA-231 in the mouse brain capillaries. The overall extravasation efficiencies of the control shRNA MDA-231 at 24- and 48-hour time points were comparable to previous reports of lung and melanoma cancer cells (11). On the other hand, CCR2 KD significantly impaired MDA-231 extravasation at 24 and 48 hours (Fig. 5F). In addition, while the extravasation potential of control shRNA MDA-231 increased over time (from ~12% at 24 hours to ~21% at 48 hours), that of CCR2 KD shRNA MDA-231 remained relatively constant (~5% at 24 hours and ~7% at 48 hours), consistent with our hypothesis that the latter are not activated in the brain microenvironment. Extravasated control shRNA MDA-231 were found to remain in close proximity with brain capillaries following transmigration (Fig. 5, G and H, and fig. S11B), adopting a perivascular position as formerly observed in the case of lung and melanoma TCs in mouse brains (11). Although early in the metastatic cascade, our results are in agreement with previous findings, suggesting that TCs aim to co-opt the vasculature following transmigration to form successful metastases (11, 51, 52).

To investigate one of the rate-limiting steps of brain metastasis formation, namely, extravasation across the BBB, the tightest vascular barrier in the body, we used a 3D in vitro human BBB model to evaluate, in real time, the mechanisms influencing cancer cell extravasation. Progress in this area has previously been hampered by the lack of proper in vivo and in vitro platforms to model TC extravasation and to identify relevant players in this key step of the metastatic cascade. Our in vitro human BBB MVN model overcomes major limitations of currently available models by improving the relevance to human physiology with a 3D cellular architecture and morphology recapitulating brain capillaries, increasing the experimental throughput and spatiotemporal resolution, and allowing for the isolation and identification of cellular and molecular factors directly affecting TC extravasation (15, 53, 54). We also validated our platform as a tumor model assay through a comparison to in vivo and 2D in vitro findings from previous studies (12). MDA-BrM exhibited increased extravasation efficiencies in the triculture BBB MVNs compared to MDA-LM and parental MDA-231, and we verified ST6GALNAC5 to be one of the important factors promoting extravasation, as observed in previous in vivo and in vitro studies (12).

Through the sequential integration of brain stromal cells in the 3D MVNs, we were able to identify some of the key cellular and molecular players in TC transmigration across the BBB. ACs were found to promote extravasation at the brain through secretion of CCL2, which targets the CCR2 receptor expressed by TCs. Via CCL2-driven chemotaxis and chemokinesis, the extravasation and migratory potentials of TCs were considerably enhanced in the BBB MVNs. The KD of AC-secreted CCL2 or tumor-expressing CCR2 resulted in significant decreases in extravasation, attesting to the central role of the CCL2-CCR2 AC-cancer cell axis in metastasis at the brain. CCR2 blockade alone was sufficient to reduce the extravasation levels of MDA-BrM below those of the parental MDA-231 line, which was not the case when ST6GALNAC5 was individually silenced. The significance of the CCL2-CCR2 axis in brain extravasation was validated in vivo, where CCR2 KD in TCs reduced extravasation efficiencies and cancer cell numbers in the brain after intracardiac injection compared to control TCs. These results suggest that the CCL2-CCR2 axis is one of the important mediators of TC extravasation at the brain.

The CCL2-CCR2 axis has been shown to play a role in colorectal cancer cell extravasation at the lung, where endogenous secretion of CCL2 by TCs resulted in altered barrier properties and improved transmigration (35). In addition, up-regulated CCL2 secretions by ACs in response to inflammatory conditions such as brain metastasis (9), glioma (55), epilepsy (56), or autoimmune diseases (57, 58) have been shown to promote trafficking of immune cell, including CCR2-positive T cells, monocytes, and myeloid cells. These studies are consistent with our findings that increased secretion of CCL2 by ACs plays an important role in promoting extravasation at the brain.

However, elevated CCL2 levels at the brain during inflammation (59), particularly in the context of ischemia (60, 61), have been found to disrupt the adherens junctions of the BBB, hence its permeability. Unexpectedly, however, triculture MVNs with PCs and ACs exhibited reduced rather than increased vascular permeabilities compared to vessels composed of iPS-ECs alone. The permeability values in our triculture BBB MVNs (table S1) are comparable to those found in vivo by other groups (61, 62). Even in the presence of extravasating TCs or upon incubation with CM from TCs for up to 24 hours, barrier permeability remained unchanged in all four MVN platforms. This suggests that BBB integrity is not significantly altered during the time that most TCs extravasated and that inflammation of the brain endothelium is not responsible for the increased cancer cell transmigration observed in the triculture system. Rather, the direct interactions between ACs and TCs through the CCL2-CCR2 pathway, via both chemotaxis and chemokinesis, are major contributors to extravasation in our model.

In summary, the in vitro 3D BBB MVN model is a unique platform to functionally interrogate molecular and cellular mechanisms during brain extravasation. With this model, we revealed the central role of ACcancer cell interactions via the CCL2-CCR2 pathway, in promoting TC extravasation across the BBB. Inhibition of CCR2 in cancer cells resulted in greater reductions of their extravasation efficiencies compared to inhibition of the previously identified ST6GALNAC5 signaling pathway (12). In the future, combinatory inhibitions of both CCR2 and ST6GALNAC5 would be worth exploring as prevention treatments for brain metastasis.

The objective of this study was to investigate the role of human brain ACs in TC extravasation in an in vitro microvascular BBB model and to validate these findings in vivo. CCL2 was found to be up-regulated by ACs and was found to promote extravasation through CCR2 expressed on TCs, via both chemotaxis and chemokinesis. In addition, ST6GALNAC5, previously found to promote brain metastases in mice, was validated to play a role in extravasation in the in vitro microvascular BBB model. The dual KD of CCR2 and ST6GALNAC5 further reduces extravasation and could be exploited in the clinic. In all in vitro experiments, six devices per condition were used unless otherwise indicated.

These findings were validated in mouse, where CCR2 KD in circulating TCs significantly reduced their transmigration at the brain. In all in vivo mice experiments, four mice per time point and per condition were used. All animal studies were approved by the Massachusetts Institute of Technology (MIT) Institutional Animal Care and Use Committee.

Human iPS-ECs [Cellular Dynamics International (CDI)], human brain PCs (catalog no. 1200, ScienCell), and human brain ACs (catalog no. 1800, ScienCell) were cultured as described previously (15) and used at passage 5 for all experiments. For time-lapse imaging, iPS-ECs were stably transduced with the LentiBrite GFP Control Lentiviral Biosensor (Millipore Sigma), PCs were transduced with a tagBFP plasmid (Lenti-ef1a-dcas9-vp64-t2a-tagBFP; catalog no. 99371, Addgene; gift from the Jacks laboratory, MIT), and ACs were transduced with a tdTomato plasmid (PGK-Luc-EFS-tdTomato; gift from the Jacks laboratory, MIT).

For the extravasation assays, breast MDA-MB-231 [American Type Culture Collection (ATCC)], brain metastatic variant MDA-BrM2a, and lung metastatic variant MDA-LM2-4175 were obtained from the Massagu group (12, 27) following stable transduction with a triple modality reporter gene, thymidine kinase, green fluorescent protein (GFP), and luciferase (TGL), as previously described (63, 64). The Massagu cells were maintained in Dulbeccos Modified Eagles Medium (DMEM) (catalog no. 11995073, Gibco) supplemented with 10% fetal bovine serum (FBS; catalog no. 26140-079, Invitrogen). Breast SKBR3 (ATCC) and lung A549 (ATCC) were stably transduced with the LentiBrite RFP Control Lentiviral Biosensor (Millipore Sigma) and maintained in DMEM supplemented with 10% FBS. Prostate 22Rv1 (ATCC) were maintained in RPMI supplemented with 10% FBS and were stained with the CellTracker Orange CMRA (Invitrogen) at 1 M in phosphate-buffered saline (PBS) for 10 min at 37C and 5% CO2. The shRNA-mediated KD of CCR2 was performed on MDA-231 with CCR2 MISSION shRNA bacterial glycerol stock [clone ID: NM_001123041.2-1247s21c1 (human), Millipore Sigma]. Control MDA-231 cells were treated with nontarget shRNA control plasmid DNA MISSION TRC2 pLKO.5-puro (SHC216, Millipore Sigma). Target sequences are shown in table S1.

The 3D microfluidic devices used in this study were fabricated using soft lithography as previously described (16, 17) and comprise a single microchannel for cell seeding and two adjacent media channels with dimensions outlined in detail elsewhere (15). To recapitulate the in vivo organization of the BBB and isolate the effects of the different stromal cells on barrier characteristics and TC extravasation, four MVN platforms were used by culturing different combinations of iPS-ECs, PCs, and ACs in a fibrinogen-thrombin gel (Fig. 1A) (15). For all four platforms, iPS-ECs were resuspended at 5 million cells/ml in the fibrin hydrogel. For the coculture of iPS-EC + AC and the triculture of iPS-EC + PC + AC, ACs were resuspended at 1 million cells/ml and mixed in the fibrinogen-thrombin gel with the iPS-ECs or with both the iPS-ECs and PCs, respectively. For the coculture of iPS-EC + PC, PCs were resuspended at 1 million cells/ml in the fibrin hydrogel and mixed with iPS-ECs. The PC cell density was decreased to 0.5 million cells/ml in the triculture of iPS-EC + PC + AC to ensure a final PC-to-EC ratio on day 7 similar to that found in in vivo mice brains. The triculture iPS-EC + PC + AC model was found to recapitulate the in vivo BBB most closely (table S2). To test the influence of AC-secreted CCL2 on TC extravasation, the KD of CCL2 in ACs was performed before device seeding using a Silencer Select siRNA probe at 10 M (s12567, Thermo Fisher Scientific) with Lipofectamine RNAiMAX reagent (13778030, Thermo Fisher Scientific) in Opti-MEM reduced serum medium (31985062, Thermo Fisher Scientific). A Silencer Select Negative Control siRNA was used as a control (no. 2, 4390843, Thermo Fisher Scientific). ACs were treated twice more than 48 hours with siRNA probes and left to rest for an additional 24 hours in fresh media before device seeding with iPS-ECs and PCs to form triculture BBB MVNs. Total RNA from ACs was collected at day 0 (MVN seeding) and at day 7 (TC extravasation experiments) from replated ACs following device seeding, as described below. The KD of CCL2 in the ACs was confirmed via qRT-PCR using the protocol and the CCL2 TaqMan Gene Expression Assay mentioned below.

All devices were cultured in VascuLife media (Lifeline Cell Technology) supplemented with 10% FBS and 2% l-glutamine, according to the protocol developed by CDI. For the first 4 days of culture, this media was supplemented with vascular endothelial growth factorA (VEGF-A) (50 ng/ml) (catalog no. 100-20, PeproTech) in each of the four platforms to promote vasculogenesis following cell seeding. The addition of VEGF-A (50 ng/ml) was performed identically and consistently in all MVN platforms, and the results were compared across platforms.

iPS-ECs, PCs, ACs, and MDA-231 cells were plated onto six-well plates in their respective media until 60% confluence, after which media was replaced with VascuLife basal media (without growth factors). Cells were incubated for 24 hours, and CM was collected as previously described (31) and stored at 80C until use. To test the influence of MDA-231 on the cytokine production of iPS-ECs, PCs, and ACs, a six-well plate with Transwell inserts was used. MDA-231 were added to the bottom compartment, and iPS-ECs, PCs, and ACs were plated onto the insert at a 7:1 ratio with the TCs, as determined via cell quantification in 3D triculture MVNs perfused with MDA-231. Media was replaced with basal VascuLife once the iPS-ECs, PCs, or ACs reached 60% confluence, and cells were incubated for an additional 24 hours before CM collection. The CM of iPS-ECs, PCs, and ACs cultured above MDA-231 was collected exclusively from the inserts and labeled as iPS-EC (+MDA-231), PC (+MDA-231), and AC (+MDA-231).

To assess the MVN permeability, a monolayer of iPS-ECs was added to both media channels of the microfluidic device on day 4 following cell seeding by perfusing 50 l of iPS-ECs resuspended at 1 million cells/ml in VascuLife (29). Permeability was measured on day 8 using 10- and 40-kDa fluorescein isothiocyanate (FITC)dextrans at 0.1 mg/ml (FD10S, FD40S, Millipore Sigma), as previously described (29), via imaging using a confocal laser scanning microscope (FV1000, Olympus) with an environmental chamber maintained at 37C and 5% CO2. Following automatic thresholding and segmentation using the Fiji distribution of ImageJ [National Institutes of Health (NIH)], z-stack images were used to generate a 3D mask of the microvasculature as previously defined (29). At times, MVNs were perfused with MDA-231 on day 7, and the permeability was assessed 24 hours following perfusion on day 8. In addition, CM from MDA-231 was collected as described above and used to treat MVNs on day 7 in a 1:1 ratio with iPS-EC media. The permeability was assessed 24 hours following incubation with CM on day 8. Average vessel diameter and other MVN dimensions (average branch length, average cross-sectional area, surface area of the vessels, and 3D volume of the vessels) were computed as previously described (15, 29) by using the 3D mask generated from the MVN perfusion with dextran in ImageJ.

Cells plated in 2D or in Transwell inserts were fixed with 2% paraformaldehyde for 10 min, permeabilized with 0.1% Triton-X for 5 min, and blocked with 4% bovine serum albumin (BSA) and 0.5% goat serum in PBS overnight at 4C on a shaker. Relevant cytokines were observed by staining the fixed 2D plated cells with anti-CCL2 (MAB279, R&D Systems), anti-IGFBP4 (18500, Proteintech), antiPDGF-BB (PA5-19524, Invitrogen), anti-CCR2 (711255, Thermo Fisher Scientific), and anti-ST6GALNAC5 (MAB67151, R&D Systems) at 1:200 in PBS overnight at 4C. Microfluidic chips were fixed with 4% paraformaldehyde for 15 min, permeabilized with 0.1% Triton-X for 5 min, and blocked with 4% BSA and 0.5% goat serum in PBS overnight at 4C on a shaker. Following a PBS wash, protein visualization was achieved by staining the fixed devices with anti-CD31 (ab3245, Abcam), anti-PDGF receptor b (ab69506, Abcam), anti-GFAP (ab10062, Abcam), and antiCCL2/MCP-1 (2D8, Invitrogen) at 1:200 in PBS overnight at 4C on a shaker. After washing, cells and devices were incubated with secondary antibodies at 1:200 in PBS (Alexa Fluor 488 goat anti-rabbit A-11008, 568 goat anti-rabbit A-11011, or 633 goat anti-mouse A-21052; Invitrogen) and 4,6-diamidino-2-phenylindole (DAPI) (D1306, Invitrogen) at 1:1000 in PBS overnight at 4C on a shaker. Imaging was performed with a confocal laser scanning microscope (FV1000, Olympus).

Following staining of CCL2 in devices with fluorescently labeled iPS-ECs, PCs, and ACs, MFI per cell volume was computed by collecting stacks covering the full gel thickness containing MVNs using a 20 objective at a resolution of 800 800 pixels with a z-spacing of 5 m. For each channel corresponding to each cell type (iPS-ECs, PCs, or ACs), automatic thresholding and segmentation were performed using the Fiji distribution of ImageJ (NIH) as described previously (29). The 3D masks generated for each cell type were used to compute the total cell volume and determine MFI, when applied on the channel with CCL2 staining. For 2D staining, MFI per cell area was computed by measuring the mean intensity of the antibody of interest per area and normalizing over DAPI intensity.

Mice brains were harvested at two different time points (24 and 48 hours) following ultrasound-guided intracardiac perfusion of TCs and immediately fixed whole with 4% paraformaldehyde (v/v) in PBS at room temperature for 48 hours. Fixing with paraformaldehyde perfusion was avoided to prevent the high flow rates of perfusion from detaching intravascular TCs. Fixed brains were sectioned in 100-m-thick slices with a vibrating blade microtome (VT1000S, Leica Biosystems) and washed with a wash buffer constituted of 1% Triton X (v/v) in PBS on a shaker. Brain slices were incubated with blocking buffer [10% goat serum (v/v) with 1% Triton X (v/v) in PBS] for 4 hours at room temperature on a shaker. Following washing in wash buffer, samples were incubated in mouse anti-CD31 (553370, BD Biosciences) at 1:100 in wash buffer for 5 days at room temperature on a shaker to visualize the brain microvasculature (65). Brain slices were washed in wash buffer and incubated in secondary antibody (Alexa Fluor 633 goat anti-rat A-21094, Invitrogen) at 1:250 for 5 days at room temperature on a shaker. Samples were washed in wash buffer and placed on a glass coverslip for confocal imaging (FV1000, Olympus). Images were acquired using a 60 oil objective to visualize individual TCs and the brain vasculature.

Undiluted CM from MDA-231 and iPS-ECs, PCs, and ACs with or without MDA-231 was assayed using a human 80-cytokine array (AAH-CYT-5, RayBiotech) following the manufacturers protocol. Cytokine levels were also evaluated with the Human Cytokine Array/Chemokine Array 42-Plex (HD42, Eve Technologies Corp.) from undiluted media pooled from the media channels of three microfluidic chips per experimental repeat.

ST6GALNAC5 protein levels were measured with a human a-N-acetylgalactosaminide a-2,6-sialyltransferase 5 (ST6GALNAC5) ELISA kit (AMS.E01A1995, Amsbio) from cell lysates obtained from TCs cultured in 2D in 24-well plates. Four wells per TC were used for this assay.

Gene expression was quantified via real-time qRT-PCR. Cells were plated in 2D in wells of a 24-well plate, and total RNA was isolated and purified using the RNeasy Mini Kit (74104, Qiagen) according to the manufacturers instructions. The concentration of total RNA was measured using a NanoDrop 1000 spectrophotometer. cDNA was synthesized using the High-Capacity RNA-to-cDNA Kit (4387406, Thermo Fisher Scientific) according to the manufacturers protocol. Real-time qRT-PCR was performed on the 7900HT Fast Real-Time PCR System using the TaqMan Fast Advanced Master Mix (4444556, Thermo Fisher Scientific) as previously described (30). Glyceraldehyde phosphate dehydrogenase (GAPDH) was used as a housekeeping gene, and the following genes with respective TaqMan Gene Expression Assays (Thermo Fisher Scientific) were used: GAPDH (Hs01921207_s1), ST6GALNAC5 (Hs05018504_s1), CCR2 (Hs00704702_s1), CCL2 (Hs00234140_m1), CCR4 (Hs00747615_s1), IL-8 (Hs00174103_m1), CXCR1 (Hs01921207_s1), and CXCR2 (Hs01891184_s1).

TC extravasation assays were performed on day 7 once the vasculature was stabilized morphologically (15, 54). TCs were resuspended at 1 million cells/ml and a 20-l suspension volume was perfused in the MVNs as previously described (17, 31) via a 10-min hydrostatic pressure drop between the two media channels of the device. Media was replenished, and extravasation was quantified as described (66) at different time points following perfusion. TCs observed to cross the endothelium partially or completely were classified as extravasated cells, and the percentage of extravasation or extravasation efficiency was measured as the ratio of extravasated cells to the total number of TCs per device for each time point and MVN condition.

The effect of PC- or AC-secreted factors on TC extravasation was determined by treating monoculture MVNs of iPS-EC alone with PC, PC (+MDA-231), AC, or AC (+MDA-231) CM obtained as described above. TCs were perfused in the MVNs in a 1:1 ratio of CM and iPS-EC media (necessary for MVN stability), and extravasation was quantified at different time points.

The KD of ST6GALNAC5 in the TCs was performed with Silencer Select siRNA probes at 10 M [s224888 as siRNA #1 (human) and s37827 as siRNA #2 (human); Thermo Fisher Scientific] using Lipofectamine RNAiMAX reagent (13778030, Thermo Fisher Scientific) in Opti-MEM reduced serum medium (31985062, Thermo Fisher Scientific). Silencer Select Negative Control siRNAs were used as controls (nos. 1 and 2; 4390843, Thermo Fisher Scientific). TCs were treated twice more than 48 hours with siRNA probes and left to rest for an additional 24 hours in fresh media before perfusion in the MVNs. KD was validated with qRT-PCR using TaqMan Gene Expression Assays GAPDH (Hs01921207_s1, Thermo Fisher Scientific) as control and ST6GALNAC5 (Hs05018504_s1, Thermo Fisher Scientific).To test the influence of various relevant cytokines on TC extravasation, MVNs were incubated with anti-CCL2 at 10 g/ml (MAB279), antiIL-8 at 1 g/ml (MAB208), antiIGFBP-4 at 20 g/ml (MAB8041), anti-CCL26 at 15 g/ml (MAB653), antiIL-6 at 3 g/ml (MAB2061), anti-OPN at 12 g/ml (AF1433), and antiPDGF-BB at 3 g/ml (AF220), either individually or altogether (R&D Systems). Incubation was performed for 30 min at 37C and 5% CO2 before TC perfusion, without washing. At times, TCs were also incubated with anti-CCL2 at 10 g/ml (MAB279) for 30 min at 37C and 5% CO2 followed by a PBS wash and perfusion in untreated MVNs. Extravasation was quantified 6 hours following perfusion. To block CCR2 or CCR4, MVNs or TCs were incubated with a CCR2 antagonist at 50 M (227016, Millipore Sigma) and/or a CCR4 antagonist at 500 nM (21885, Cayman Chemical). Incubation was performed 24 hours before TC perfusion and repeated 1 hour before perfusion, followed by a PBS wash. Antagonists were resuspended in dimethyl sulfoxide (DMSO) before dilution in MVN or TC media. A DMSO control was used on both MVNs and TCs when quantifying extravasation. TC extravasation was quantified at 6, 12, and 24 hours after perfusion.

To test the influence of CCL2 in the MVNs on TC extravasation, rhCCL2 at various concentrations (279-MC-010, R&D Systems) was used to treat MVNs, followed by a PBS wash before perfusion. The KD of CCL2 in the TCs was also performed with Silencer Select siRNA probes at 10 M (s12566 and s12567, Thermo Fisher Scientific) using Lipofectamine RNAiMAX reagent (13778030, Thermo Fisher Scientific) in Opti-MEM reduced serum medium (31985062, Thermo Fisher Scientific). Silencer Select Negative Control siRNAs were used as controls (nos. 1 and 2; 4390843, Thermo Fisher Scientific). TCs were treated twice more than 48 hours with siRNA probes and left to rest for an additional 24 hours in fresh media before perfusion in the MVNs. The KD of CCL2 in the TCs was confirmed via ELISA (DCP00, R&D Systems).

To test the influence of CCL2 on migration in 2D, MDA-231 were plated in a 24-well glass-bottom plate and treated with different concentrations of rhCCL2 (279-MC-010, R&D Systems). Time-lapse images of TC migration in 2D were obtained at 15-min intervals for 6 hours following treatment using a confocal microscope (Olympus) with environmental chamber maintained at 37C and 5% CO2. Resulting TC speeds and migration tracks in 2D (x and y displacements) were graphed for 50 randomly selected TCs per rhCCL2 condition.

To quantify migration of TCs and ACs in 3D, time-lapse images of extravasating TCs were obtained with fluorescently labeled triculture MVN cells at 30-min intervals. At times, MVNs were treated with anti-CCL2 or TCs were treated with an antagonist for CCR2 as defined above before TC perfusion and live imaging with a confocal microscope (Olympus) with environmental chamber maintained at 37C and 5% CO2.

Over the course of extravasation, distances between the centers of ACs and extravasating TCs were quantified. Given that the average vessel branch length of the triculture MVNs is ~200 m, ACs located within a 200 m diameter centered on the TC were classified as near the TC and were considered in the distance measurements. The speeds of TCs, ACs near extravasating TCs, and ACs in control MVNs without TCs were also measured over time. Using the 3D time-lapse images of TC extravasation in the triculture MVNs, speeds and AC-TC distances were quantified over time via the Manual Tracking function of the TrackMate plugin in the Fiji distribution of ImageJ (NIH). Briefly, the x-y-z coordinates of the centers of TCs and ACs were tracked at each time point, and their speeds were obtained in micrometers per hour. The AC-TC distances were obtained in micrometer by averaging the distances of all ACs found near extravasating TCs. A time frame of 90 min before and after extravasation was considered to quantify the fold change in AC-TC distance (with respect to the first time point, 90 min before extravasation).

The number of ACs near extravasating TCs was also quantified by counting ACs located within a 200-m diameter centered on the TC. As for AC-TC distances, this count was presented as a fold change in number of ACs with respect to the first time point 90-min before extravasation.

A finite element model was developed to evaluate the spatial distribution of CCL2 in the MVNs using the COMSOL Multiphysics software. A bifurcating microvascular geometry similar as previous models from our group (31) was used, with a diameter and branch length corresponding to values measured in this study. A TC was modeled as a solid sphere of similar size adjacent to a wall within the vascular domain. Similarly, ACs were modeled as spheres with the same surface area as ex vivo measurements from electron micrographs (67). A total of seven ACs were distributed across the extracellular domain with an average distance of 10 m from the vascular walls, both number and distance corresponding to experimental measurements in the MVNs.

CCL2 was modeled as a species with a similar molecular weight (10 kDa) to approximate its diffusion coefficient (D = 150 m2/s). A constant flux of the species was ascribed to the surface of the modeled ACs, and a surface consumption of 0.5 s1 C was applied to the TC, as previously done in studies modeling TC morphogen consumption (68, 69). To account for the transvascular transport of CCL2, a thin diffusion barrier was introduced between the extracellular and vascular domains, through which both paracellular and transcellular transports of the species were considered. The relative flux of the species through this barrier is given by product of the differential concentration across the domains and the species-specific permeability (P) (Nvasc = PCCL2 C). This permeability value accounts for the diffusive transport between endothelial junctions and CCR2-regulated transcytosis of CCL2 (70). The former was obtained from permeability measurements of 10-kDa FITC-dextran performed in this study. The transcellular contribution was approximated from our previous study in MVNs (29). For the computational models incorporating convection due to fluid flow in the MVNs, an incompressible Stokes flow behavior was appliedP=2uu=0where is the viscosity, P is the pressure across the system, and u is the velocity vector field. Within the vascular domain, the inlet fluid velocity was set at a physiological value of 0.5 mm/s (40). Mass conservation resulted in the same velocity at the outlet, and a no-slip boundary condition was applied to the internal vascular walls. A symmetry boundary condition (nN = 0) was applied on the lateral boundaries of the extracellular domain given the periodic pattern of the vessels across the microfluidic device. A no-flux condition was applied at the top and bottom boundaries since they are situated close to the upper and lower walls of the device (n DC = 0).

A quasi-steady state assumption was made for all the models, given that the diffusion and convection time scales (~1 to 10 s) are two to three orders of magnitude lower than the cellular movement time scales (~1000 s), obtained from measurements in the MVNs. It was thus assumed that the species achieves a steady distribution before the onset of cell migration. The mass conservation and transport equations are reduced toN=RN=DC+uCwhere N is the flux, R accounts for the source and consumption of the species, and C is the molar concentration. The models were numerically solved using the Transport of Diluted Species module in COMSOL, and the concentration profiles were visualized by generating heatmaps of the species concentration in the MVNs with a lodged TC and ACs in the surrounding matrix.

All animal studies were approved by the MIT Institutional Animal Care and Use Committee. Athymic nude (NU/J) mice were purchased from the Jackson laboratory. MDA-231 cells were treated with the CCR2 MISSION shRNA Bacterial Glycerol Stock or the nontarget shRNA control plasmid DNA MISSION TRC2 pLKO.5-puro as a control shRNA (Millipore Sigma), and CCR2 gene expression was validated via real-time qRT-PCR. Once CCR2 KD was confirmed, mice were injected with a 100-l suspension of TCs in PBS at 0.5 million cells/ml via ultrasound-guided intracardiac injections (49). Half of the mice were injected with the CCR2 KD MDA-231, and the other half were injected with the control shRNA MDA-231. Mice were sacked, and their brains were collected at two different time points following intracardiac injection (24 and 48 hours). Whole brains were fixed via immersion in 4% paraformaldehyde in PBS at room temperature for 48 hours. Brains were sliced, stained, and mounted on coverslips for imaging as described above. Eight 100-m brain slices per mouse were imaged via confocal microscopy using a 10 objective to quantify number of TCs lodged in the brain capillaries or parenchyma. To quantify TC extravasation, confocal imaging was performed using a 60 oil-based objective for adequate visualization of TCs and extravasation events over the entire 100-m-thick brain slices. Two randomly selected ROIs per brain slice were imaged for each mouse (eight slices total), and extravasation was computed as the ratio of extravasated cells to total number of TCs per mouse, as done in vitro.

All data are plotted as means SD, unless indicated otherwise. All boxes show quartiles, center lines show means, and whiskers show SDs. Statistical significance was assessed using Students t tests performed with the software OriginPro when comparing two conditions/groups. When comparing more than two groups, significance was assessed using one-way analysis of variance (ANOVA) with Tukey post hoc test (if the unequal variance assumption holds, as measured by Levenes test for homogeneity of variance) or using Brown-Forsythe and Welch ANOVA with Dunnetts T3 post hoc test (if the unequal variance assumption is violated) with the software GraphPad Prism. Significance is represented as follows: n.s. stands for not significant, n.s.# stands for not significant across all conditions (pairwise), *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001. In all in vitro experiments, six devices per condition were used unless otherwise indicated. In all in vivo mice experiments, four mice per time point and per condition were used.

Acknowledgments: We thank M. Gillrie for the help transfecting iPS-ECs with the GFP construct; Y. Chen for the help transfecting MDA-MB-231 with the CCR2 KD and control shRNA constructs; N. Henning, V. Spanoudaki, and the Preclinical Imaging and Testing core facility for the help in mice intracardiac tumor cell injections; A. Burds Connor and the Preclinical Modeling Facility for the help in mice brain harvests; K. Cormier for histology support; and the Swanson Biotechnology Center for the exceptional core facilities. We also thank all the members of the Kamm laboratory for helpful discussions while developing this work. Funding: C.H. is supported by the Ludwig Center for Molecular Oncology Graduate Fellowship and by grant U01 CA202177 from the National Cancer Institute (NCI). Y.S. acknowledges support from Cure Alzheimers Fund. J.C.S. is supported by a National Science Foundation (NSF) graduate research fellowship. L.L. was supported by the Swiss National Science Foundation (SNSF) Early and Advanced Postdoc Mobility Fellowships and the Hope Funds Postdoctoral Fellowship. T.J. is a Howard Hughes Medical Institute investigator, a David H. Koch professor of Biology, and a Daniel K. Ludwig scholar. T.J. also acknowledges support from the Ludwig Center for Molecular Oncology and Cancer Center Support Grant (CCSG) P30 CA14501 from the NCI. Author contributions: C.H., Y.S., and R.D.K. designed the study. C.H., Y.S., and L.L. performed the experiments. J.C.S. performed the computational simulations. C.H. and L.L. analyzed the data. T.J. and R.D.K. supervised the work. C.H. and R.D.K. wrote the manuscript, and all authors contributed to its final form. Competing interests: R.D.K. is a cofounder of AIM Biotech that markets microfluidic systems for 3D culture. R.D.K. also receives financial support from Amgen, Biogen, and Gore. T.J. is a member of the Board of Directors of Amgen and Thermo Fisher Scientific. He is also a cofounder of Dragonfly Therapeutics and T2 Biosystems. T.J. serves on the Scientific Advisory Board of Dragonfly Therapeutics, SQZ Biotech, and Skyhawk Therapeutics. None of these affiliations represent a conflict of interest with respect to the design or execution of this study or interpretation of data presented in this manuscript. T.J. laboratory currently also receives funding from the Johnson & Johnson Lung Cancer Initiative and the Lustgarten Foundation for Pancreatic Cancer Research, but this funding did not support the research described in this manuscript. The authors declare that they have no other competing interests. Data and materials availability: All data needed to evaluate the conclusions in the paper are present in the paper and/or the Supplementary Materials. Additional data related to this paper may be requested from the authors.

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The CCL2-CCR2 astrocyte-cancer cell axis in tumor extravasation at the brain - Science Advances

Pharmacogenomic approach to cure the pain of the ‘burning man’ – Lab + Life Scientist

Inherited erythromelalgia is a rare and potentially devastating syndrome associated with severe burning pain in the hands and feet, creating a major unmet medical need.

More than 100 million Americans suffer from chronic pain of varying degrees, with the lack of effective but non-addictive painkillers partially contributing to the national substance abuse crisis. Potent opiates are often addictive, while other painkillers may be associated with poor tolerability, resulting in suboptimal pain control from many indications. Developing next-generation painkillers, therefore, has enormous value.

While chronic pain is often caused by injury, it can also be caused by genetic variants that naturally occurred in humans, such as in inherited erythromelalgia (IEM). Also called Man on Fire syndrome, it is associated with chronic burning pain in the hands and feet that cannot be relieved by common painkillers. Research from my work and others has led to new insights into pain pathophysiology in patients with IEM, as well as advancements in therapy.

The pain associated with IEM is caused by a genetic mutation in the SCN9A gene, which produces a hyperactive Nav1.7 sodium channel. The Nav1.7 channel is considered a pain channel since it is directly involved in many human pain syndromes. Through extensive research, we identified more than two dozen SCN9A mutations that lead to IEM. Consequently, for these patients, one-size-fits-all pain medication does not work. Currently, IEM treatment is a matter of trial and error. One of our major research goals, therefore, was to develop a precision medicine approach to treating these patients based on their genetic background.

While most patients with IEM do not respond to any available pain medications, there are exceptions. In the clinic, it was found that patients with one particular mutation on the SCN9A gene, V400M, responded to a non-selective sodium channel blocker that is traditionally used to treat seizures called carbamazepine (CBZ). Using patch-clamp analysis, it was found that CBZ normalises activation of the hyperactive Nav1.7 mutant and therefore makes it act more like wide-type.

The responsiveness of V400M to CBZ was encouraging and motivated us to identify additional mutations that might respond to the drug. To do this, we constructed a human Nav1.7 3D structure model to locate IEM mutations. Using this approach, we identified another common IEM-associated mutation, S241T, located very close to V400M. The proximity between these two mutations led us to suspect that they may be affected by CBZ in a similar manner.

To study the functional consequence of these mutations in intact pain-sensing neurons, and to test how these neurons responded to CBZ, we used microelectrode array (MEA) technology.

An MEA is a grid of tightly spaced microelectrodes, and theyre often used in the study of neural activity or circuits. They may be placed in the brains of living animals, but they can also be embedded in the wells of a multi-well cell culture plate allowing for in vitro modelling (Figure 1).

Figure 1: (Left) Image of a neuron grown over an MEA electrode. Voltage activity from the neuron is recorded (green) and individual neural signals or action potentials (white) are automatically tracked. (Right) In an MEA culture dish, the location and time of every recorded action potential (AP) is assigned a tick mark. The relationship between tick marks (or APs) reveals deep insights about how the neurons are interacting. Watch the full video here.

This arrangement allows us to culture sensory neurons in vitro and record the electrical activity noninvasively over weeks to months of these cultured pain-sensing neurons. Also, this technique enables us to grow replicates of the culture and simultaneously test multiple genetic, pharmacological and environmental manipulations (Figure 2). For example, we could study multiple mutations at once, and since IEM is triggered by warmth, we could also test the effect of temperature on the model using a built-in precise temperature control of the MEA system.

Figure 2: (Left) Multiwell solutions allow scientist to track up to 96 neural cell cultures simultaneously, accelerating scientific discovery and changing the way scientists ask questions. (Right) 48-well CytoView MEA plate being docked into a Maestro Pro MEA system, with built-in precise temperature and CO2 control.

Using this MEA system, we performed experiments to address our main question: can we develop a personalised medicine approach to guide the drug selection process for IEM patients based on their genetic background?

We grew neuron cultures harbouring one of several IEM-associated mutations. In neurons featuring the S241T mutation, CBZ significantly reduced the firing frequency, as well as the number of active DRG sensory neurons, when compared to vehicle treatment. We found this difference to be statistically significant. Conversely, when we performed this same test on a different F1449V mutation, we found that CBZ does not have a major effect on these neurons.

Figure 3: Pain in a dish. (Top row) Neurons expressing the Nav1.7S241T mutation fire significantly more action potentials than wild-type (WT) neurons, and this effect is exacerbated with increasing temperatures. (Bottom row) When these neurons were treated with carbamazepine (CBZ), the firing frequency was greatly reduced, suggesting CBZ as a potential treatment for IEM patients with S241T mutations. Watch the webinar here.

Altogether, we demonstrated that the effect of CBZ is mutant-specific, suggesting the need for a more personalised approach towards treating IEM. The data suggests that the mutation Nav1.7S241T may respond to CBZ.

Next, we aimed to take our research findings and test them in the clinic. After a nationwide search, we identified two IEM patients carrying the Nav1.7S241T mutation who were eager to participate in our study. Together with our colleagues, we designed a randomised, placebo-controlled double-blind crossover clinical trial for these two patients. We gave the patients either a placebo or CBZ for six weeks and we recorded their responses in several ways.

We found that CBZ reduced pain more than the placebo did. Specifically, it reduced total pain duration, episode duration and the number of times it woke the patient up during sleep. Together with our colleagues, we also performed functional MRI and found that while the patient on placebo showed brain activity in areas associated with chronic pain, the patient on CBZ showed brain activity in brain areas associated with acute pain a pattern that indicates that CBZ affects how the brain responds to pain signals in patients harbouring the SCN9AS241T mutation.

These results show that precision medicine, guided by genomic analysis and functional profiling, provides a promising way to transform pain treatment. With continued research and analysis, we aim to shift the paradigm of a trial-and-error approach to identify effective painkillers to a personalised medicine approach based on the genetic make-up of individual patients to treat chronic pain in the near future.

*Dr Yang Yang is currently an Assistant Professor at Purdue University in the Department of Medicinal Chemistry and Molecular Pharmacology, also affiliated with Purdue Institute for Integrative Neuroscience. His current research focuses on pharmacogenomics, induced pluripotent stem cells (iPSCs) and neurological diseases, including chronic pain, epilepsy, autism and neurodegenerative diseases. Using state-of-the-art technologies, Y Lab aims to understand how genetic mutations of key genes including ion channels contribute to neurological diseases, and to develop novel pharmacogenomic approaches for disease intervention.

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Pharmacogenomic approach to cure the pain of the 'burning man' - Lab + Life Scientist

The Stem Cell Assay Market To Grow Through Mergers Amongst Market Participants The Courier – The Courier

The healthcare arm, with GDPR and HIPPA in effect, will focus on well-being analysis, thereby putting it as a market enabler. This regulated and organized practice is bound to give the Stem Cell Assay Market analysts and consultants an edge over the conventional practices of healthcare.

The undifferentiated biological cells that can differentiate into specialized cells are called as stem cells. In the human body during early life and growth phase, stem cells have the potential to develop into other different cell types. Stem cells can differ from other types of cells in the body. There are two types of stem cells namely the embryonic stem cells and adult stem cells. Adult stem cells comprise of hematopoietic, mammary, intestinal, neural, mesenchymal stem cells, etc. All stem cells have general properties such as capability to divide and renew themselves for long period. Stem cells are unspecialized and can form specialized cell types. The quantitative or qualitative evaluation of a stem cells for various characteristics can be done by a technique called as stem cell assay. The identification and properties of stem cells can be illustrated by using Stem Cell Assay.

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The new developments in the field of stem cell assay research related to the claim of stem cell plasticity have caused controversies related to technical issues. In the study of stem cell assay, most conflicting results arise when cells express stem cell characteristics in one assay but not in another. The most important factor is that the true potential of stem cells can only be assessed retrospectively. The retrospective approach refers to back drop analysis which provides quantitative or qualitative evaluation of stem cells. The development in embryonic & adult stem cells assay will be beneficial to the global stem cell assay market.

Stem cell assays find applications in pharmaceutical & biotechnology companies, academic & research institutes, government healthcare institutions, contract research organizations (CROs) and others. The influential factors like chronic diseases, increased investment in research related activities, and technological advancements in pharmaceutical & biotech industry is anticipated to drive the growth of the global stem cell assay market during the forecast period. The cost of stem cell based therapies could be one of the major limiting factor for the growth of the global stem cell assay market.

The global stem cell assay market has been segmented on the basis of kit type, application, end user and region. The global stem cell assay market can be differentiated on the basis of kit type into human embryonic stem cell kits and adult stem cell kits. The adult stem cell kit includes hematopoietic stem cell kits, mesenchymal stem cell kits, induced pluripotent stem cell kits (IPSCs), and neuronal stem cell kits. The adult stem cell kits are projected to witness the highest CAGR during the forecast period due to the ease of use, cost & effectiveness of this type of kit in stem cell analysis.

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Based on application global stem cell assay market is based on drug discovery and development, therapeutics and clinical research. The therapeutics segment includes oncology, dermatology, cardiovascular treatment, orthopedic & musculoskeletal spine treatment, central nervous system, diabetes and others.

Depending on geographic segmentation, the global stem cell assay market is segmented into five key regions: Asia Pacific, North America, Europe, Latin America, and Middle East & Africa. North America is expected to contribute significant share to the global stem cell assay market. The stem cell assay market in Europe, has gained impetus from the government & industrial initiatives for stem cell based research and the market in Europe is expected to grow at a remarkable pace during the forecast period.

The major players in the global stem cell assay market include GE Healthcare, Promega Corporation, Thermo Fisher Scientific Inc., Merck KGaA, Cell Biolabs, Inc., Hemogenix Inc., Stemcell Technologies Inc., Bio-Rad Laboratories Inc., R&D Systems Inc., and Cellular Dynamics International Inc.

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The Stem Cell Assay Market To Grow Through Mergers Amongst Market Participants The Courier - The Courier

Accelerated Biosciences’ Immune-Privileged Human Trophoblast Stem Cells (hTSCs) Offer Breakthrough Opportunities in Cancer-Targeting Therapeutics and…

CARLSBAD, Calif.--(BUSINESS WIRE)--Accelerated Biosciences, a regenerative medicine innovator, announced today new data that further demonstrates statistically significant cytolysis with induced pluripotent stem cell (iPSC)-derived natural killer (NK) cells programmed from its ethically sourced human trophoblast stem cells (hTSCs). Pluristyx, a Seattle-based firm supporting drug development, regenerative medicine, and cell and gene therapies, further confirmed Accelerated Biosciences hTSC line offers before-unrealized opportunities in cell-specific therapeutics. Along with this recent data on successful iPSC differentiation, Accelerated Biosciences has already demonstrated efficient differentiation of its pluripotent stem cells with remarkable doubling times and growth characteristics to programmed NK, cartilage, bone, fat, neuron, pancreas, liver, and secretome cells.

This new data validates our findings, explains Yuta Lee, President and Founder of Accelerated Biosciences. We know the properties of our trophoblast stem cells have been long-sought by the medical science community because of the potential to speed and amplify the development of life-saving therapeutics; theyre immune privileged, chromosomally stable (not tumorigenic), pathogen free, pluripotent, easy to scale and manufacturer, and of special interest, they are ethically sourced from the chorionic villi (pre-placental tissue) of non-viable and often life-threatening tubal ectopic pregnancies. Mr. Lees father, Professor Jau-Nan Lee, MB, MD, PhD, an obstetrics and gynecologic physician and researcher in Taiwan, first isolated hTSC in 2003. Mr. Lee created Accelerated Biosciences to elevate the visibility of this pluripotent human trophoblast stem cell platform to those engaged in developing allogeneic cell therapeutics and has been instrumental in the filing and prosecution of intellectual property to protect the companys hTSC platform to date holding 34 patents.

Benjamin Fryer, PhD, Co-founder and CEO of Pluristyx, worked closely with Accelerated Biosciences to prepare much of its key hTSC data. Dr. Fryer, a trophoblast expert who was previously a research scientist at Janssen Research & Development of Johnson & Johnson, now serves on Accelerated Biosciences Scientific Advisory Board. Initially I was skeptical these cells were what they said they were. If we hadnt grown and characterized them in our lab, I might have remained skeptical. These are indeed trophoblast stem cells, explained Dr. Fryer. The potential of these cells is enormous. One of the industrys largest challenges is that its almost impossible to scale primary cells. These cells are scalable. With these cells you can make the amount required for millions of patients and theyre sourced compliant to regulatory requirements. Weve made IPS cells (induced pluripotent stem cells) and NK (natural killer) cells from them, which is the next wave of cells for cell therapies. For therapeutic developers, because these cells are not sourced from a person or viable embryo, these cells deliver the trifecta of legal, ethical, and IP advantages.

As the biotechnology industry works toward developing therapies that target only diseased cells without harming healthy cells and tissues, cell-based therapies draw increasing interest, explains industry expert, Martina Molsbergen, CEO of C14 Consulting, who has partnered with Accelerated Biosciences in a business development role. With all the promise that cell therapies hold, the biotechnology industry also remains concerned that the therapeutics are derived in a socially and ethically responsible manner. Accelerated Biosciences has discovered and is now offering what scientists see as the holy grail of stem cell sources.

Prominent biosciences experts have been drawn to Accelerated Biosciences cell breakthrough. Protein chemist and molecular biologist Igor Fisch, PhD, former President and CEO of Selexis, Geneva, Switzerland, recognizes the impact that Accelerated Biosciences hTSCs will have on human health: Not only are these cells politically correct, but they can also differentiate. Because they are sourced from pre-placenta material, theyre immune privileged, which means that are not seen as foreign by the human body. With these cells, we can create a cell bank a single source for a wide range of patients.

Peter Hudson, FTSE, BSc Hons, PhD, Chief Scientist and a senior advisor to Avipep P/L in Melbourne, Australia, and an adjunct professor at the University of Queensland, led a large oncology consortium to complete the first Phase 1 clinical trial of a novel engineered antibody targeting prostate and ovarian cancer. Hudsons interest in Accelerated Biosciences hTSCs has evolved into a role on its Scientific Advisory Board. Trophoblast stem cells are likely to be the next wave of cancer-targeting therapeutics, explains Dr. Hudson. The ability to ethically source trophoblast stem cells and program them to target only diseased, cancerous cells is very powerful technology.

Why are scientists so interested in stem cell-based therapies?

The human body constantly produces specialized cells from its own stem cells (undifferentiated cells) to renew and repair itself. Current therapies harness this power in autologous cell therapies in which the patients own cells are removed, differentiated into disease-fighting cells, and reinserted.

What makes the human trophoblast stem cell so important to medical science?

The human trophoblast stem cell (hTSC) comes from placental tissue and has special properties that make it extremely desirable to therapeutic developers. The hTSC is such an early stem cell that it has much more capacity for growth than a stem cell taken from an adult, for example. This means that one cell can become millions. The hTSC also carries with it the same immune-privilege that a growing embryo has inside its mother: its not seen as foreign although its genetically different than its mother. Unlike other foreign materials, the hTSC is not rejected by the human body, which means that it can be used with many different patients (allogeneic cell therapy). With these benefits, the scientific community holds a high regard for hTSCs, but it also faces socio-ethical concerns about how those stem cells are typically sourced.

Accelerated Biosciences sidesteps hTSC sourcing concerns in a profoundly elegant way. Dr. Jau-Nan Lee, an OB-GYN in Taiwan, found inspiration in what was considered medical waste. When surgical intervention was necessary to remove an ectopic pregnancy that would otherwise risk the womans life, the non-viable embryo and pre-placental tissue lodged in the fallopian tube was removed, sent to pathology, and discarded. Gaining permission from institutional colleagues and sampling the pre-placental tissue, Dr. Lee isolated hTSC that offered all the benefits of hTSC pluripotency, immune privilege, and scalability without pathogens and without ethical compromises.

About Accelerated Biosciences

Founded in 2013, Accelerated Biosciences is a private company focused on regenerative medicine and built around the hTSC discoveries of obstetrics and gynecology physician and researcher, Professor Jau-Nan Lee, MB, MD, PhD. Accelerated Biosciences holds a large and robust patent portfolio and an encumbrance-free intellectual property (IP) estate. Accelerated Biosciences mission is to leverage its renewable, immune-privileged human cell source to fuel breakthrough cell therapies that effectively target the most challenging diseases of the human body. For more information about Accelerated Biosciences, visit acceleratedbio.com or email mmolsbergen@c14consultinggroup.com.

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Accelerated Biosciences' Immune-Privileged Human Trophoblast Stem Cells (hTSCs) Offer Breakthrough Opportunities in Cancer-Targeting Therapeutics and...

Study Models the Effect of Herpes Infection on Fetal Brain Development – Pharmacy Times

HSV-1 can spread to the fetal brain during pregnancy and cause lifelong neurological problems, such as cognitive dysfunction, learning disabilities, and dementia.

Three cell-based models shed light on how herpes simplex virus type 1 (HSV-1) infection may contribute to various neurodevelopmental disabilities and long-term neurological problems into adulthood, according to a study published in PLOS Pathogens. HSV-1 can spread to the fetal brain during pregnancy and cause lifelong neurological problems, such as cognitive dysfunction, learning disabilities, and dementia.

Progress in understanding the role of HSV-1 in human fetal brain development has been hampered by restricted access to fetal human brain tissue. Additionally, existing animal models are limited in their applicability to humans. To address the knowledge gap, the investigators generated 3 cell-based neurodevelopmental disorder models, including a 2D layer of cells and a 3D brain-like structure. These models are based on human-induced pluripotent stem cells (hiPSCs), which are immature, embryonic stem cell-like cells. These hiPSCs are generated by genetically reprogramming specialized adult cells.

According to the investigators, HSV-1 infection in neural stem cells derived from hiPSCs resulted in activation of the caspase-3 apoptotic pathway, which initiates programmed cell death. HSV-1 infection also impaired the production of new neurons and hindered the ability of hiPSC-derived neural stem cells to convert into mature neurons through a process called neuronal differentiation.

The study also found that the HSV-1-infected brain organoids mimicked the pathological features of neurodevelopmental disorders in the human fetal brain, including impaired neuronal differentiation and abnormalities in brain structure. In addition, the 3D model showed that HSV-1 infection promotes the abnormal proliferation and activation of non-neuronal cells called microglia, accompanied by the activation of inflammatory molecules, such as TNF-alpha, IL-6, IL-10, and IL-4.

According to the authors, the findings open new therapeutic avenues for targeting viral reservoirs relevant to neurodevelopmental disorders. They added that the study provides novel evidence that HSV-1 infection impaired human brain development and contributes to the neurodevelopmental disorder pathogen hypothesis.

REFERENCE

How herpes infection may impair human fetal brain development [news release]. EurekAlert; October 22, 2020. Accessed May 7, 2021. https://www.eurekalert.org/pub_releases/2020-10/p-hhi101520.php

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Study Models the Effect of Herpes Infection on Fetal Brain Development - Pharmacy Times

Induced Pluripotent Stem Cells Market is set for Lucrative Growth | Top Companies Thermo Fisher Scientific Inc., FUJIFILM Corporation, KSU | The…

The Induced Pluripotent Stem Cells market is expected to grow at a CAGR of 9.7% and is poised to reach $XX Billion by 2027 as compared to $XX Billion in 2020. The factors leading to this extraordinary growth is attributed to various market dynamics discussed in the report. Our experts have examined the market from a 360 degree perspective thereby producing a report which is definitely going to impact your business decisions. In order to make a pre-order inquiry, kindly click on the link below:- https://decisivemarketsinsights.com/induced-pluripotent-stem-cells-market/93040505/pre-order-enquiry

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Key Companies Operating in this Market

Thermo Fisher Scientific Inc., FUJIFILM Corporation, Horizon Discovery Ltd., Takara Bio Inc, Cell Applications, Inc., Lonza Group AG, Evotec A.G., ViaCyte, Inc., CELGENE CORPORATION, Fate Therapeutics, Astellas Pharma Inc.,

Market by Type (Hepatocytes, Fibroblasts, Keratinocytes, Amniotic Cells, Neuronal Cells, Cardiac Cells, Vascular Cells, Immune Cells, Renal Cells, Liver Cells, Others

Market by Application Academic Research, Drug Development & Discovery, Toxicity Screening, Regenerative Medicine

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Induced Pluripotent Stem Cells Market is set for Lucrative Growth | Top Companies Thermo Fisher Scientific Inc., FUJIFILM Corporation, KSU | The...

Stem Cell Therapy Market by Type, Therapeutic Application and Cell Source – Global Forecasts to 2026 – ResearchAndMarkets.com – Business Wire

DUBLIN--(BUSINESS WIRE)--The "Global Stem Cell Therapy Market by Type (Allogeneic, Autologous), Therapeutic Application (Musculoskeletal, Wound & Injury, CVD, Autoimmune & Inflammatory), Cell Source (Adipose tissue, Bone Marrow, Placenta/Umbilical Cord) - Forecasts to 2026" report has been added to ResearchAndMarkets.com's offering.

The global stem cell therapy market is projected to reach USD 401 million by 2026 from USD 187 million in 2021, at a CAGR of 16.5% during the forecast period.

Growth in this market is majorly driven by the increasing investment in stem cell research and the rising number of GMP-certified stem cell manufacturing plants. However, factors such as ethical concerns and the high cost of stem cell research and manufacturing process likely to hinder the growth of this market.

The allogeneic stem cell therapy segment accounted for the highest growth rate in the stem cell therapy market, by type, during the forecast period

The stem cell therapy market is segmented into allogeneic and autologous stem cell therapy. Allogeneic stem therapy segment accounted for the largest share of the stem cell therapy market. The large share of this segment can be attributed to the lesser complexities involved in manufacturing allogeneic-based therapies.

This segment is also expected to grow at the highest growth rate due to the increasing number of clinical trials in manufacturing allogeneic-based products.

Bone Marrow-derived MSCs segment accounted for the highest CAGR

Based on the cell source from which stem cells are obtained, the global stem cell therapy market is segmented into four sources. These include adipose tissue-derived MSCs (mesenchymal stem cells), bone marrow-derived MSCs, placenta/umbilical cord-derived MSCs, and other cell sources (which include human corneal epithelium stem cells, peripheral arterial-derived stem cells, and induced pluripotent stem cell lines).

The bone marrow-derived MSCs segment is expected to witness the highest growth rate during the forecast period, owing to an increasing number of clinical trials focused on bone marrow-derived cell therapies and the rising demand for these cells in blood-related disorders.

Asia Pacific: The fastest-growing country in the stem cell therapy market

The stem cell therapy market is segmented into North America, Europe, Asia Pacific, RoW. The stem cell therapy market in the Asia Pacific region is expected to grow at the highest CAGR during the forecast period.

Factors such as the growing adoption of stem cell-based treatment in the region and the growing approval & commercialization of stem cell-based products for degenerative disorders drive the growth of the stem cell therapy market in the region.

Market Dynamics

Drivers

Restraints

Opportunities

Challenges

Companies Mentioned

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Stem Cell Therapy Market by Type, Therapeutic Application and Cell Source - Global Forecasts to 2026 - ResearchAndMarkets.com - Business Wire

Global Induced Pluripotent Market Showing Impressive Growth by 2027||Thermo Fisher Scientific; Cell Applications, Inc.; Axol Bioscience Ltd.;…

A complete Induced Pluripotent market analysis report is created by thoroughly understanding business environment which best suits the requirements of the client. With this market research document it becomes easy to develop a successful marketing strategy for the business. This market research report is a complete overview of the market that takes into account various aspects of product definition, market segmentation based on various parameters, and the established merchant landscape. Estimations about the rise or fall of the CAGR value for specific forecast period are also mentioned in the report. A credible Induced Pluripotent market report not only gives an advantage to develop the business but also helps to outshine the competition.

The induced pluripotent market is expected to gain market growth at a potential rate of 9.2% in the forecast period of 2020 to 2027. Increase in the expenditure incurred by various private and government sources on R&D is the vital factor escalating the induced pluripotent market growth.

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Few of the major competitors currently working in the induced pluripotent market areBristol-Myers Squibb Company; CELGENE CORPORATION; Astellas Pharma Inc.; Thermo Fisher Scientific; Cell Applications, Inc.; Axol Bioscience Ltd.; Organogenesis Holdings; Merck KGaA; FUJIFILM Holdings Corporation; Fate Therapeutics; KCI Licensing, Inc.; Japan Tissue Engineering Co., Ltd.; Vericel; ViaCyte, Inc.; STEMCELL Technologies Inc.; Horizon Discovery Group plc; Lonza; Takara Bio Inc.; Promega Corporation and QIAGEN.

The report provides insights on the following points:

Induced Pluripotent Market Scope and Market Size

The induced pluripotent market is segmented on the basis of product, cell type, application and end-user. The growth among segments helps you analyse niche pockets of growth and strategies to approach the market and determine your core application areas and the difference in your target markets.

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Market Drivers

Market Restraints

Table of Contents:

1 Introduction

2 Research Methodologies

3 Executive Summary

4 Premium Insights

5 Market Overview

6 Industry Trends

7 Compliance in Induced Pluripotent Market

8 Induced Pluripotent Market, By Service

9 Induced Pluripotent Market, By Deployment Type

10 Induced Pluripotent Market, By Organization Size

11 Induced Pluripotent Market Analyses, By Vertical

12 Geographic Analyses

13 Competitive Landscapes

14 Detailed Company Profiles

15 Related Reports

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