Both copies of the Oct4 gene physically come together just as embryonic stem cells begin to develop into tissue-specific cell types

IMAGE:We and other mammals have two copies of each gene, and each copy, or ‘allele,’ was thought to remain physically apart from the other in the cell nucleus. David Spector’s… view more

Credit: Spector Lab, CSHL

Cold Spring Harbor, NY — Imagine a pair of twins that everyone believed to be estranged, who turn out to be closer than anyone knew. A genetic version of this heartwarming tale might be taking place in our cells. We and other mammals have two copies of each gene, one from each parent. Each copy, or “allele,” was thought to remain physically apart from the other in the cell nucleus, but a new study finds that alleles can and do pair up in mammalian cells.

Intriguingly, the pairing of at least one set of alleles has been observed to coincide with a critical time in the life of a stem cell: the moment when it commits to develop into a specific cell type. This process is called differentiation.

In work published today in Cell Stem Cell a team of researchers led by Professor David L. Spector at Cold Spring Harbor Laboratory (CSHL) showed that the two alleles of Oct4, a gene important in embryonic stem cells, did not come together randomly, at any time or place, but did so at the developmental point at which stem cells begin their maturation into specific cell types.

Spector, along with Megan Hogan, Ph.D., lead author on the new paper, and colleagues, began by observing the location within the cell nucleus of various genes known to be important in stem cells. “We examined hundreds of cells, and we made the interesting and unexpected finding that the two alleles of the Oct4 gene tended to co-localize together in about 25% of the cells,” Spector says. “This was really unexpected, but it’s the sort of image that’s worth a thousand words.”

Examining enough single cells to make sure the team was observing a widespread phenomenon was no easy task. “It was a lot of work, but I think in the end the pictures that come out of it, the stories that we have gotten out if it, makes it worth it,” says Hogan, a recent doctoral student in the Spector Lab and now a postdoctoral investigator at the Icahn School of Medicine at Mount Sinai.

To figure out if what they were seeing was physiologically important, the team studied whether they could manipulate the timing of the Oct4 pairing during differentiation. They used different methods to cause the stem cells to differentiate, and found that the more rapidly the cells differentiated, the earlier Oct4 pairing occurred. “This supported the notion that this was a potentially very exciting finding,” Spector says.

To confirm that the Oct4 pairing wasn’t something that only occurred in tissue culture, the team then looked in mouse embryos. “The pairing was equal to or even a little bit more frequent than in culture, and that was really comforting and extremely convincing to us that there is physiological relevance to this,” Spector says.

Link:
Twin copies of gene pair up in embryonic stem cells at critical moment in differentiation

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